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[203 residues]
Trusted matches - domains scoring higher than the gathering threshold (A)

Domain Start End Bits Evalue Alignment Mode
Resolvase 6 157 120.40 4.4e-33 Align ls
HTH_7 160 202 27.60 3.7e-05 Align ls


Potential matches - Domains with Evalues above the cutoff

Domain Start End Bits Evalue Alignment Mode
HTH_3 171 198 12.30 0.014 Align fs
Sigma70_ECF 183 198 3.60 0.84 Align fs


Alignments of Pfam-A domains to HMMs

Format for fetching alignments to seed

Alignment of Resolvase vs UNKNOWN-QUERY/6-157

                   *->aigYaRVSTddQqeQdySlerQleaLraygkcepGwkivge.ifvDk
                        +Y+R ST+d   Qd    r l+ L+ + +     ++ ++ ++v+ 
  UNKNOWN-QU     6    TRIYLRASTKD---QD--AKRALQILQDLNQNL---NLGETiVYVEN 44   

                   gvSGkkldeRPgLqrlLedlregkgDtlvVtklDRLgRs.lrdllelvee
                    +SG+kld RP+L++lL+ + +  gDtl+V+++DRL+R + rd  el ++
  UNKNOWN-QU    45 -YSGTKLD-RPELNKLLSEANQ--GDTLLVESIDRLSRLtQRDFQELKRR 90   

                   LeekGvslvsldepgltf.idtstpm.Grl.......lltilaalAEfER
                   ++ekG +lv++d+p++++ i  s++++  + +  ++ l+++la++A+++ 
  UNKNOWN-QU    91 IQEKGLRLVVADLPTTYQmIQASDSItHSIlelinnmLIDLLATMARLDN 140  

                   elIrERtkeGlaaAkarGky<-*
                   e+++ER k+G    ++ G +   
  UNKNOWN-QU   141 EKRIERIKQG---LARSGYK    157

Alignment of HTH_7 vs UNKNOWN-QUERY/160-202

                   *->GRppklneeakdinevvtLleeGeisikqIAkefniSRsTvYRylaa
                      G +    ++     ++++Ll +G++++ +IAk++n++++TvYR+ a+
  UNKNOWN-QU   160    GKKANEAKH----KRIKELLVAGNMTKEEIAKAVNCGVATVYRV-AK 201  

                   s<-*
                   +   
  UNKNOWN-QU   202 V    202

Alignment of HTH_3 vs UNKNOWN-QUERY/171-198

                   *->lkelRkkkelglsqeeLAeklGskvsrstisk<-*
                      +kel    + +++ ee+A++++    ++t+ +   
  UNKNOWN-QU   171    IKELLV--AGNMTKEEIAKAVN--CGVATVYR    198

Alignment of Sigma70_ECF vs UNKNOWN-QUERY/183-198

                   *->eEiAekLgvSkRTveR<-*
                      eEiA++ +++++Tv+R   
  UNKNOWN-QU   183    EEIAKAVNCGVATVYR    198